Signature	SharedGeneNum	SharedGenes	AvgPval	BreastC_M13 HOXB_UniqueNum	BreastC_M13 HOXB_pVal	BreastC_M13 HOXB_Unique	ColonC_M3 Enterocyte_UniqueNum	ColonC_M3 Enterocyte_pVal	ColonC_M3 Enterocyte_Unique
Blood_Module-2.8_T_cells	2	CYFIP2|SKAP1	8.65461793172e-05	1	5.32473661564e-05	NELL2	16	0.000119844992478	AXIN2|BCL11B|BIN1|BTBD11|DYRK2|FAM171A1|NMT2|OCIAD2|RETREG1|SATB1|SH3YL1|TCF7|TGIF2|TRABD2A|ZNF711|ZNF827
CEBP_01	3	HOXB3|HOXB6|SKAP1	0.000439928667384	0	0.000631615519854		28	0.000248241814914	AKIRIN2|BCL11B|C11ORF49|CHD6|DMD|DNM3|ELAVL2|EVA1A|FABP1|JARID2|KIAA0355|MECOM|MYLIP|NCKAP5|NPAS2|PCDH8|PDE3B|PER2|RALY|RBM39|RNF43|SEMA3A|SEPHS2|SPINK5|SRSF6|TNMD|TOP1|YTHDF1
CTTTAAR_UNKNOWN	4	HOXB3|HOXB7|HOXB8|SKAP1	0.000147893074524	1	0.000227721494307	NELL2	82	6.80646547405e-05	ABCB1|ACE2|ACVR1C|ADD3|AHCY|AKAP1|APLP2|AQP8|ATP1A1|BCL9|BCL11B|BIN1|CA4|CACNA1D|CCDC71L|CEBPB|CHKA|CLDN1|CPNE1|DIDO1|DMD|DNAJA2|DPP10|EDN1|EIF2AK3|ELAVL2|ELMO2|EPB41L5|ERBIN|ESRRG|F2RL1|FOXQ1|FXYD3|H2AFY2|JARID2|KBTBD12|KRT20|LCOR|LGR5|LRRC36|MAP1LC3A|MECOM|MGAT4A|MGAT4B|MSI2|MSX2|MYCL|NCKAP5|NCOA6|NEDD4|NR5A2|PDE3B|PDE6A|PITX2|PLA2G12B|PMEPA1|PPP1R14C|PROX1|PYROXD1|RNF44|SATB1|SEMA3A|SHANK2|SLC39A5|SLC44A1|SMAD6|SNCAIP|SRC|SRPX2|SSBP4|STK38L|SUMF1|TBX3|TCF7|TMEM56|TMEM150A|TOB1|TOP1|TSGA10|TTC17|XKRX|ZBTB18
FAC1_01	5	HOXB3|HOXB4|HOXB6|HOXB7|HOXB8	0.00042157220383	0	1.62566943489e-07		20	0.000842981840716	BCL11A|CACNA1D|CBX4|CHD6|EFNA1|EPS8|GNAS|HIPK1|ID4|JARID2|KLF7|LCOR|NKD1|NOL4L|PITX2|REPS2|SEMA3A|SRSF6|TBXAS1|ZMYND8
HNF1_Q6	3	CYFIP2|HOXB3|HOXB9	0.00024567943966	0	0.000490043339031		32	1.31554028963e-06	APOM|AXIN2|BCL9|BCL11A|CBFA2T2|DMD|F2RL1|FGFR4|GAS2|GOLT1A|GUCA2B|HNF4A|KBTBD12|LRRFIP2|NCKAP5|NPAS2|SATB2|SEMA3A|SERPINA6|SGK2|SLC12A2|SLC13A2|SLC39A5|SLC44A3|SPINK1|SRSF6|TBXAS1|TINAG|TMED6|UGT2A3|ZMYND8|ZNF827
Li(PMID: 24336226)-2013-MolSigVaccines_Hox cluster II (M17.1)	5	HOXB3|HOXB5|HOXB6|HOXB7|HOXB-AS3	0.000246436569152	0	5.15391400991e-14		0	0.000492873138253	
Li(PMID: 24336226)-2013-MolSigVaccines_Hox cluster IV (M17.3)	5	HOXB4|HOXB5|HOXB6|HOXB7|HOXB9	8.70475753435e-05	1	2.24295372166e-18	HOXB2	0	0.000174095150687	
TCF4_Q5	3	HOXB4|HOXB6|HOXB7	0.000198469608351	0	0.000391848659975		29	5.09055672631e-06	AKAP1|AMMECR1L|BMP7|CBFA2T2|CHN2|CPNE1|DACH1|EFNA4|ENPP5|FGGY|GPX2|KBTBD12|KRT23|LY6G6E|MAP2K6|MME|MYCL|NKD1|OGG1|PANK1|PCDH8|PROX1|RBM39|SCG3|SH3RF2|TCF7|TFDP2|ZBTB18|ZNF703
animal organ morphogenesis [GoID:GO:0009887; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	6	HOXB3|HOXB4|HOXB5|HOXB6|HOXB7|HOXB8	6.22802572719e-05	1	8.98514518706e-07	HOXB2	80	0.000123662000025	ACVRL1|AREG|ASXL1|AXIN2|BBS5|BCL11B|BMP4|BMP7|BTRC|CDX2|CEACAM1|CEBPB|CELA1|CRB2|CTSH|DIO3|EDN1|EFNA1|EPHB2|EREG|FGF18|FGFR3|FGFRL1|FOXO3|FZD5|GNAS|HIPK1|HOXB13|ID1|ID2|ID3|ID4|IFT52|IHH|ITGA2|KLHL3|LEFTY1|LRP4|MLLT3|MSX2|MYC|NEDD4|NKD1|NPNT|NR5A2|PITX2|PPARGC1B|PROX1|PSMA7|PTK7|SATB2|SEMA3A|SEMA3C|SEMA6A|SHROOM2|SLC6A4|SLC40A1|SMAD6|SMAD7|SOSTDC1|SOX4|SP5|SP6|SRC|SRSF6|SSUH2|STOX1|STRA6|TBX3|TCF7|TEAD2|TGM2|TLE2|TOPORS|TRAF6|TSPAN12|TUFT1|WNK4|WNT11|ZNRF3
anterior_posterior pattern specification [GoID:GO:0009952; evidenceTypes:IBA|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	7	HOXB3|HOXB4|HOXB5|HOXB6|HOXB7|HOXB8|HOXB9	0.00019927961972	1	1.0011770349e-13	HOXB2	18	0.000398559239339	AURKA|AXIN2|BMP4|CDX2|CRB2|DMRT2|EPB41L5|ETS2|FZD5|HIPK1|MLLT3|MSX2|NKD1|PCDH8|POFUT1|SEMA3C|TBX3|TDGF1
chordate embryonic development [GoID:GO:0043009; evidenceTypes:IBA|IC|IDA|IEA|IEP|IMP|ISS|NAS|TAS]	7	HOXB3|HOXB4|HOXB5|HOXB6|HOXB7|HOXB8|HOXB9	0.000160482074494	1	3.76858942445e-10	HOXB2	47	0.00032096377213	ACVR1B|ACVRL1|APBA1|ASCL2|AXIN2|BCL2L1|BMP4|BMP7|CDX2|CEBPA|CEBPB|CRB2|DMRT2|EDN1|EIF2S2|EPB41L5|FZD5|GNAS|HS6ST1|IFT52|IHH|KDM4C|MBTD1|NKD1|PCDH8|PITX2|PLCG1|POFUT1|POU5F1|PRKACB|PROX1|PTK7|RCN1|RIPPLY3|SATB2|SDC4|SEMA3C|SLC30A1|SOX4|ST14|STK4|TBX3|TCF7|TEAD2|TRAF6|TTPA|WNT11
chr17q21	9	HOXB3|HOXB4|HOXB5|HOXB6|HOXB7|HOXB8|HOXB9|HOXB-AS3|SKAP1	0.000146860593425	1	1.46285877114e-17	HOXB2	21	0.000293721186849	ACSF2|AKAP1|DLX4|ETV4|FAM215A|HOXB13|KRT15|KRT20|KRT23|KRT40|LINC00483|LRRC37A3|MSL1|PCTP|PRAC1|PRAC2|PYY|SP6|TOB1|TTC25|WNK4
embryo development [GoID:GO:0009790; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	7	HOXB3|HOXB4|HOXB5|HOXB6|HOXB7|HOXB8|HOXB9	0.000153433659121	1	2.33074050964e-08	HOXB2	75	0.000306844010837	ACVR1B|ACVRL1|AKIRIN2|APBA1|ARFRP1|ASCL2|AXIN2|BBS5|BCL2L1|BMP4|BMP7|CDX2|CEBPA|CEBPB|CRB2|CXXC4|DMRT2|DNMT3A|EDN1|EFNA1|EIF2S2|EPB41L5|EPHB2|ETS2|FZD5|GNAS|HIPK1|HNF4A|HS6ST1|ID2|ID3|IFT52|IHH|ITGA2|KDM4C|LNPK|LRP4|MAP3K20|MBTD1|MSX2|NKD1|NR5A2|PCDH8|PIK3CB|PITX2|PKDCC|PLCG1|POFUT1|POU5F1|PRKACB|PROX1|PTK7|RCN1|RIPPLY3|RPS6KA6|SATB2|SDC4|SEMA3A|SEMA3C|SLC30A1|SMAD6|SOX4|ST14|STK4|STOX1|STRA6|TBX3|TCF7|TDGF1|TEAD2|TGIF2|TOP1|TRAF6|TTPA|WNT11
embryo development ending in birth or egg hatching [GoID:GO:0009792; evidenceTypes:IBA|IC|IDA|IEA|IEP|IMP|ISS|NAS|TAS]	7	HOXB3|HOXB4|HOXB5|HOXB6|HOXB7|HOXB8|HOXB9	0.000200875788127	1	4.05853337243e-10	HOXB2	47	0.0004017511704	ACVR1B|ACVRL1|APBA1|ASCL2|AXIN2|BCL2L1|BMP4|BMP7|CDX2|CEBPA|CEBPB|CRB2|DMRT2|EDN1|EIF2S2|EPB41L5|FZD5|GNAS|HS6ST1|IFT52|IHH|KDM4C|MBTD1|NKD1|PCDH8|PITX2|PLCG1|POFUT1|POU5F1|PRKACB|PROX1|PTK7|RCN1|RIPPLY3|SATB2|SDC4|SEMA3C|SLC30A1|SOX4|ST14|STK4|TBX3|TCF7|TEAD2|TRAF6|TTPA|WNT11
pattern specification process [GoID:GO:0007389; evidenceTypes:IBA|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	7	HOXB3|HOXB4|HOXB5|HOXB6|HOXB7|HOXB8|HOXB9	0.000106227841856	1	3.00472668427e-11	HOXB2	36	0.000212455653665	AURKA|AXIN2|BBS5|BMP4|BMP7|CDX2|CRB2|CXXC4|DMRT2|DRC1|EDN1|EPB41L5|ETS2|FZD5|HIPK1|IFT52|IFT74|IHH|KIF3B|LEFTY1|LRP4|MLLT3|MSX2|NKD1|PCDH8|PITX2|POFUT1|PRKACB|RIPPLY3|SATB2|SEMA3A|SEMA3C|SMAD6|SOSTDC1|TBX3|TDGF1
